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JMD 2005, Vol. 7, No. 3
Copyright © 2005 American Society for Investigative Pathology & Association for Molecular Pathology

Novel Molecular Method for Detection of Bovine-Specific Central Nervous System Tissues as Bovine Spongiform Encephalopathy Risk Material in Meat and Meat Products

Amir Abdulmawjood, Holger Schönenbrücher and Michael Bülte

From the Institut für Tierärztliche Nahrungsmittelkunde, Justus-Liebig-Universität Giessen, Giessen, Germany


    Abstract
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
The emergence of a new variant of Creutzfeldt-Jacob disease during the bovine spongiform encephalopathy epidemic has focused attention on the use of tissues from the central nervous system (CNS) in food. For efficient consumer protection, European legislation prohibits several bovine tissues, encompassing mainly the central nervous system, from the food chain. A quantitative real-time reverse transcriptase-polymerase chain reaction (RT-PCR) was designed to identify bovine spongiform encephalopathy risk material in meat and meat products. This was based on an mRNA assay that used bovine, ovine, and caprine glial fibrillary acidic protein (GFAP) encoding gene sequences as a marker. The real-time RT-PCR assay allowed the detection of bovine, ovine, or caprine CNS tissues in meat and meat products. Bovine brain at a concentration of 0.01% yielded a positive PCR reaction. The real-time RT-PCR assay included a housekeeping gene as an endogenous control. The detection was not affected by heat treatment of the meat products. The quantitative real-time RT-PCR detection of GFAP mRNA appeared to be useful as a routine diagnostic test for the detection of illegal use of CNS tissues in meat and meat products. The stability of the specific region of GFAP mRNA also allows the detection of CNS tissues after meat processing steps. The use of organ- and species-specific subunits of mRNA might be a promising approach for the detection of other banned tissues.


    Introduction
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Since 1996, evidence has been increasing for a causal relationship between ongoing outbreaks in Europe of a bovine spongiform encephalopathy (BSE) in cattle and the variant Creutzfeldt-Jakob disease in humans. However, some member states are not able to give an exact overview about the occurrence and the development of BSE disease. This is based in part on the late start with area-wide BSE tests and on the delayed implementation of prohibition of meat and bone meal for animal feeding. In the U.S., the first BSE case was announced in December 2003.1 However, there is strong evidence that BSE can cause variant Creutzfeldt-Jakob disease, most likely via the oral route of infection.2, 3, 4 Public health concerns require the efficient exclusion of ruminant tissues containing high accumulations of the causative agent (PrPSC),5 particularly brain and spinal cord, from the food chain. This is demanded by European laws. It should be mentioned that porcine central nervous system (CNS) is not affected by this legislation.6

For further risk assessment, the member states are classified according to their individual situation of reported and expected BSE cases. Hence, for the maintenance of the "BSE-free status" of the affected countries and the strong prohibition of specified bovine offal from the food chain, the detection of BSE risk material is one of the highest priority tasks for food analysts. Several phenotypic methods for detection of BSE risk material have been developed, including enzyme-linked immunosorbent assay, HPLC, Western blot, and immunohistochemical methods.7, 8, 9, 10, 11 However, these methods allowed neither differentiation of CNS tissues of banned species from CNS tissues of other animal species nor an exact quantification of the detected CNS. In addition, a test system should also allow an effective control of heat-treated samples.

In the present study, a real-time reverse transcriptase-polymerase chain reaction (RT-PCR) method based on a species-specific glial fibrillary acidic protein (GFAP) mRNA region was developed for the detection of bovine, ovine, and caprine CNS tissues in raw and heat-treated meat products. The relative quantitative technique was evaluated in CNS and other tissues of various animal origins.


    Materials and Methods
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Samples and the Internal Reference Material (IRM)
The raw meat samples used in the present investigation were purchased from a slaughterhouse in Giessen, Germany. The materials used were muscle (n = 3), liver (n = 3), heart (n = 3), kidney (n = 3), lung (n = 3), spleen (n = 3), lymph nodes (n = 3), peripheral nerves (in particular sciatic and axillaries nerves) (n = 6), and spinal cord (n = 3) from bovine subjects as well as muscle of ovine, caprine, and porcine origin. In addition, brains from bovine (n = 10), ovine (n = 3), caprine (n = 2), and porcine (n = 5) subjects were included. These were removed directly from skulls; porcine brains were taken from carcasses of pig halves. The samples were transported immediately on ice to the laboratory. Additionally, brain tissues from chicken (n = 2), turkeys (n = 2), and ducks (n = 1) were kindly provided by the Klinik für Vögel, Reptilien, Amphibien und Fische, Justus-Liebig-Universität Giessen. Likewise, cooked and raw sausages with varying additives of bovine brain (n = 4 of each) were produced as IRM according to the basic recipes provided by the guiding principles of the German Food Code.12 The preparation of the sausages is described by Lücker et al.9 The sausage filling contained 50% porcine meat (max 10% fat), 5% bovine meat, 25% porcine fat, 20% ice, 20 g/kg curing salt (4 to 5 g/kg NaNO2 in NaCl; Enders, Reiskirchen, Germany), 3 g/kg phosphate-based stabilizer (di-Na-phosphate; Kirchheimbolanden, Germany), 5 g/kg ready mixed spices for cooked sausages (Delikatess Aufschnitt, Gewürzmüller, Stuttgart, Germany), and bovine brain in varying concentrations (20, 8, 1, 0.1, and 0.01%). For preparing the cooked sausages, the contents were heated for 90 minutes at 80°C in a steam heater (Fessmann, Winnenden, Germany).

DNA Extraction
Total cellular DNA was isolated from bovine, ovine, caprine, and porcine muscle samples using the DNeasy tissue isolation kit (Qiagen, Darmstadt, Germany) according to the manufacturer’s instructions. Briefly, 25 mg of the sample was lysed, followed by binding of the DNA to the spin column (Qiagen). After washing steps, the DNA was eluted with 100 µl of elution buffer; 2.5 µl was used as a DNA template.

Amplification of GFAP-DNA Subunits
A segment of bovine, ovine, caprine, and porcine GFAP gene was amplified and sequenced. For this purpose, sequencing primers were designed using human (accession number AF028784), rat (accession number Z48978), and bovine (accession number Y08255) GFAP gene sequences already published in National Center for Biotechnology Information GenBank.

The PCR reaction mixture (50 µl) contained 1 µl of primer 1 (10 pmol/µl), 1 µl of primer 2 (10 pmol/µl), 1 µl of dNTP (10 mmol; Roche Diagnostic, Mannheim, Germany), 5 µl of 10x thermophilic-buffer (Applied Biosystems, Darmstadt, Germany), 0.2 µl of TaqDNA polymerase (5 U/µl; Applied Biosystems), and 39.3 µl of double-distilled water. Finally, a 2.5-µl of DNA preparation was added to each reaction tube. The PCR was carried out in a thermal cycler (PE GeneAmp PCR system 9600; Applied Biosystems) with the following program: one 3-minute precycle at 93°C; and 35 times for 30 seconds at 93°C, 30 seconds at 52°C, and 45 seconds at 72°C, followed by a final extension incubation of 72°C for 5 minutes. The presence of PCR products was determined by electrophoresis of 10 µl of the reaction product in a 2% agarose gel (Appligene, Heidelberg, Germany) with Tris acetate-electrophoresis buffer (0.04 mol/L Tris and 0.001 mol/L EDTA, pH 7.8) and a 100-bp DNA ladder (Roche) as molecular marker.

Sequencing of GFAP Subunit
Sequencing of the amplified subunits of bovine, ovine, caprine, and porcine GFAP gene was performed using the facilities of the university (Institut für Medizinische Mikrobiologie und Virologie, Justus-Liebig-Universität Giessen) with the MegaBACE 1000 DNA Sequencing System (Amersham Pharmacia Biotech, Freiburg, Germany) with protocols described by the manufacturer. The sequence data were further studied and analyzed with the computer program SeqMan (Lasergene; DNASTAR, Inc., Madison, WI).

Design of Specific Oligonucleotide Primers and the Fluorogenic Probe
Based on the generated bovine, ovine, caprine, and porcine GFAP gene sequences, a GFAP gene region was determined to be characteristic for the three ruminant species but not for porcine GFAP gene. The specific oligonucleotide primers were designed using the Primer Express Software (version 2.0; Applied Biosystems). The forward primer RTGcowM56F2a was selected from a region located on exon 5, whereas the reverse primer RTGcowM56R2a was selected from a region of exon 6. To avoid the amplification of DNA, the TaqMan fluorogenic minor groove binder (MGB)-probe was selected in the exon 5/exon 6 junction region and conjugated with 6-carboxy-fluorescein (FAM). The sequences of the oligonucleotide used in the real-time PCR reaction were as follows: the forward primer RTGcowM56F2a, 5'-ACC TGC GAC CTG GAG TCC T-3'; the reverse primer RTGcowM56R2a, 5'-CTC GCG CAT CTG CCG-3'; and the fluorogenic MGB probe OptiR, 6-FAM-ACT CGT TCG TGC CGC GC-MGB. The oligonucleotide primers and the fluorogenic probe were synthesized by Applied Biosystems.

RNA Extraction
Total cellular RNA was isolated from the samples using the RNeasy Lipid Tissue mini kit (Qiagen) according to the manufacturer’s instructions. Briefly, 1000 µl of Qiazol was added to a 50-mg sample, and the mixture was transferred to a glass matrix tube (FastRNA Green; Q BIOgene, Heidelberg, Germany) for cell lysis. The mixture was processed in a spin/rotation instrument for cell lysis (FastPrep-120; Q BIOgene), with a speed setting of 6 and a time setting of 45 seconds. After processing, 200 µl of chloroform was added to the mixture. The aqueous and organic layers were separated by microcentrifugation for 15 minutes at room temperature at 10,000 x g. The aqueous phase, containing the RNA, was removed and 200 µl of ethanol (70%) was added, followed by binding of the RNA to the spin-column (Qiagen). After DNase digestion with 80 µl of RNase-free DNase (Qiagen), the total RNA was washed and eluted with 50 µl of elution buffer.

Real-Time RT-PCR Analysis
Total RNA from each sample was subjected to reverse transcription using TaqMan Reverse Transcriptase Reagents kit with uracil-N-glycosylase (Applied Biosystems) according to the manufacturer’s protocol. The reactions were incubated at 25°C for 10 minutes and 48°C for 30 minutes followed by a final reverse transcriptase inactivation at 95°C for 5 minutes. Real-time PCR reactions were subsequently carried out in a 50-µl reaction mixture with final concentrations of 300 nmol/L of each oligonucleotide primer, 200 nmol/L of the fluorogenic probe, and 1x TaqMan Universal PCR Master mix (Applied Biosystems) in an ABI Prism 7000 Sequence Detection System (Applied Biosystems). Thermal cycling conditions comprised an initial UNG incubation at 50°C for 2 minutes, an AmpliTaq Gold DNA Polymerase activation at 95°C for 10 minutes, 40 cycles of denaturation at 95°C for 15 seconds, and an annealing and extension at 60°C for 1 minute. Each measurement was performed at least in duplicate, and the threshold cycle (Ct) (the fractional cycle number at which the amount of amplified target reached a fixed threshold) was determined.

Construction of Standard Curve
The GFAP cDNA concentration was estimated by using an UV spectrophotometer (DU 640; Beckman). Real-time PCR amplifications of the serially diluted GFAP cDNA were performed using the same PCR conditions mentioned above. The Ct value was defined as the number of PCR cycles required for the fluorescence signal to exceed the detection threshold value (background noise). All of the reactions were run in triplicate, and the normalized reporter signal {Delta}Rn and Ct were averaged from the values obtained in each reaction. A standard curve was then constructed by plotting the Ct of known concentration of each standard sample. The quality of the standard curve can be judged from the slope and the correlation coefficient (r). The slope of the line can be used to determine the efficiency of the target amplification (Ex) using the equation Ex = (10–1/slope) – 1.13

Endogenous Control and Relative Quantitative Analysis
The comparative Ct method was used for the relative quantitative detection of the expression of GFAP gene in different organs with the 18S rRNA as an endogenous control for each reaction. The 18S rRNA probe was labeled with the fluorescent dye FAM (Assay on Demand; Applied Biosystems). Real-time data were analyzed using the comparative Ct method. This method is similar to the standard curve method, except that it uses the arithmetic formula 2{Delta}{Delta}Ct to achieve relative quantification (Applied Biosystems User Bulletin 2). The relative expression of GFAP gene in the different organs was determined with reference to the muscle after normalization against 18S rRNA as implemented in the ABI PRISM 7000 Sequence Detection System software.14 A prior validation experiment was performed to demonstrate that amplification efficiencies of GFAP cDNA and 18S rRNA primer/probe sets.


    Results
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Sequences of GFAP Gene Subunit
According to the published human, rat, and bovine GFAP gene sequences, oligonucleotide primers were designed that allowed an amplification of subunits of bovine, ovine, caprine, and porcine GFAP genes. These partial sequences were used for the design of specific oligonucleotide primers and a fluorogenic probe and were published in GenBank under the accession numbers AY617158, AY617159, AY617160, and AY617161, respectively.

Specificity of the Real-Time GFAP RT-PCR
The designed oligonucleotide primers RTGcowM56F2a and RTGcowM56R2a allowed after reverse transcription an amplification of specific regions of bovine, ovine, and caprine GFAP mRNA isolated from brain with a size of 86 bp. No amplification could be observed with GFAP mRNA of porcine origin. Amplification of a bovine DNA preparation as positive PCR control yielded an amplicon with a size of 219 bp (Figure 1)Go . The oligonucleotide primers were subsequently used together with a fluorogenic MGB probe for TaqMan RT-PCR detection of GFAP mRNA. The real-time RT-PCR amplified bovine, ovine, and caprine GFAP mRNA, but not bovine DNA or porcine mRNA and DNA. In addition, mRNA or DNA from turkey, chicken, and duck brain tissues showed no positive signal.



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Figure 1. Typical amplification products of bovine (lane 1), ovine (lane 2), and caprine (lane 3) GFAP cDNA with a size of 86 bp; negative RT-PCR of porcine GFAP cDNA (lane 4); positive PCR control by using genomic DNA with a size of 219 bp (lane 5); and negative control (lane 6); M, DNA molecular weight marker XIII 50-bp ladder (Roche).

 
Evaluation of Housekeeping Gene as an Endogenous Control and Determination of the Detection Limit of the Real-Time GFAP RT-PCR
Using a serial dilution of a known quantity of a bovine brain GFAP cDNA standard, ranging from 9.66E – 04 to 96.67 ng/PCR, it was possible to obtain a series of amplification plots and to determine their relative Ct values. Standard curves were then constructed by plotting the Ct of the known concentration of each standard sample with the GFAP and 18S rRNA RT-PCR. Each sample was performed in triplicate, and the standard curves showed slopes of –3.561 and –3.630, respectively. The correlation coefficient (r) was >0.999 of both GFAP RT-PCR and 18S rRNA RT-PCR. This indicated that relative differences in target genes could be calculated by the comparative Ct method (Figure 2)Go . Because the Ct value decreased linearly with the increasing amount of GFAP cDNA concentration in the standard sample, the absolute quantity of the GFAP transcript in an unknown sample could be accomplished by measuring the Ct value and using the standard curve to calculate the absolute GFAP cDNA concentration. The detection limit of this real-time GFAP RT-PCR system was approximately 1.0 x 10–12 g/PCR reaction of absolute GFAP cDNA. This concentration could be detected by a Ct value of around 36 cycles (Figure 3)Go .



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Figure 2. Relative standard curves show comparable amplification efficiencies of GFAP gene (target) PCR and 18S rRNA gene (housekeeping gene) real-time RT-PCR. The {Delta} slope was <0.1.

 


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Figure 3. Real-time GFAP RT-PCR amplification curves of undiluted and 10-, 100-, 1000-, 10,000-, and 100,000-fold dilutions of bovine cDNA. On the y axis, the absolute emission intensity is indicated; the x axis shows the number of PCR cycles. The calculated cDNA concentrations are shown in the table.

 
Organ Specificity and the Relative Quantification of Real-Time GFAP RT-PCR
The mRNA of GFAP gene of three different samples of brain, spinal cord, peripheral nerves, liver, lung, spleen, heart, lymph node, and muscle from bovine subjects was determined in triplicate transcripts by relative quantitative real-time PCR. For all samples, the expression level of the GFAP gene was calculated relative to the organ muscle in the presence of the endogenous control (18S rRNA gene). The endogenous control shows a positive signal with all cDNA samples investigated. The Ct values of all non-neural organs investigated were greater than 35 cycles. The values of the relative amount of GFAP cDNA obtained from non-neural organs varied between 2.00E – 03 with kidney samples to 3.90E + 00 in investigating lymph node samples. The CNS tissues including brain and spinal cord contained 1.46E + 05 and 1.88E + 06, respectively. The relative amount of peripheral nerves was 2.41E + 02 (Table 1)Go . No fluorescent signal was detected in any of DNA samples of the various organs or in the negative RT-PCR control. Figure 4Go demonstrates the Log10 values of the relative amount of the GFAP expression in different organs investigated.


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Table 1. Relative Quantitative Detection of GFAP mRNA in Different Bovine Organs Using Comparative Ct Method ({Delta}{Delta}Ct)

 
Detection of Bovine GFAP in IRM
To test the stability and detectability of bovine GFAP mRNA after meat processing and heat treatment, cooked and raw sausages with varying additives of bovine brain (20, 8, 1, 0.1, and 0.01%) were investigated by quantitative real-time PCR (Figure 5)Go . The bovine brain was detectable in raw as well as in heat-treated sausages. The Ct values of the raw sausages with various brain concentrations ranged from 20.17 cycles for sausages containing 20% bovine brain to 32.23 cycles for sausages that comprised 0.01% of bovine brain. The Ct values of the cooked sausages ranged from 20.18 cycles for sausages containing 20% bovine brain to 33.42 cycles for sausages with 0.01% of bovine brain. The bovine DNA and the negative control as well as the sausages without added bovine brain yielded a fluorogenic signal under the threshold level (Table 2)Go . The endogenous control shows a positive signal with all cDNA of IRM investigated even after heat treatment.



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Figure 5. Detection of bovine GFAP mRNA in sausages with varying quantities of homogenized brain tissue added with ({cjs3589}) and without ({cjs3696}) heat treatment of the samples.

 

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Table 2. Detection of Bovine GFAP mRNA in Sausages with Varying Quantities of Homogenized Brain Tissue with and without Heat Treatment of the Samples

 

    Discussion
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
In the present study, a sensitive detection assay for bovine, ovine, and caprine CNS tissues was developed using an mRNA-based quantitative real-time RT-PCR with the GFAP gene as marker. This protein is expressed at high levels in the astrocyte cells of the CNS tissues but not or only at very low levels in the cellular elements of other organs and peripheral nerves.7 GFAP protein had been previously used as a marker for the detection of CNS tissues. A detection was performed by Western blotting,9, 10 by enzyme-linked immunosorbent assay,7, 8 and by immunohistochemistry.11 The disadvantage of these GFAP detection methods is that none of these methods appeared to be species specific. A species specificity could be determined by gas chromatography spectrometric analysis of the fatty acid composition of meat components15 or by PCR-RFLP analysis of GFAP mRNA.16 However, the spectrometric analysis requires expensive laboratory equipment, and the latter shows cross reactions with other organs, eg, muscle or heart. In addition, the PCR-RFLP method used a conventional detection by nonquantitative gel electrophoresis.

In the present study, partial gene sequences of bovine, ovine, caprine, and porcine GFAP genes were analyzed to find conserved and variable regions. These regions were used for the selection of species-specific oligonucleotide primers and a fluorogenic probe to amplify RT-PCR products that allow an amplification of species-specific regions of mRNA of bovine, ovine, and caprine origin but not of mRNA of porcine origin. The assay allowed the detection of CNS tissues and in parallel the identification of the species. An mRNA-based analytical test to determine the presence of CNS tissues in meat should be sensitive and should reliably avoid false-positive results of DNA contamination. Based on this consideration, we designed a MGB TaqMan probe, which was selected in the junction of exon-exon region. The presented real-time RT-PCR amplified and detected only mRNA but not bovine or porcine DNA.

The sample preparation is one of the most critical aspects of mRNA assays because this might cause false-negative results. The RNA isolation method, using a combination of a mechanical step (Fast Prep) and the RNeasy Lipid Tissue kit, as performed in this study provided a good quality of total RNA. The high lysis efficiency of this method enables extraction of a sufficient amount of total RNA in about 1 hour. In comparison with classical RNA extraction protocols, it has been shown that the selected method increased the sensitivity of the detection of GFAP mRNA in meat products (data not shown).

The typical standard curves for the quantitative real-time must be generated with an optimal correlation coefficient of >0.99. The efficiency of cDNA synthesis from an mRNA template is important for the downstream processing of cDNA quantitation. The relative quantitation standard was reverse transcribed in a batch process that included the RNA samples to be quantitated. This procedure allowed for accurate quantitation between different assays, regardless of differences in reverse transcription efficiency, as aliquots of the same standard RNA were used. The endogenous control for quantitative RT-PCR experiments functions as a control for reverse transcription and PCR reaction, as well as mRNA quantity, quality, and integrity. rRNAs are frequently used as internal controls for quantification experiments, particularly because stable expression levels of 18S rRNA relative to other housekeeping genes have been described for rat, mouse, and human tissues.17, 18 However, 18S and 28S rRNA are distinct from messenger RNAs, constituting up to 80% of total cellular RNA.19 The correlation coefficients for standard curves and efficiency values for detection of GFAP and 18S rRNA gene were excellent. The mean correlation coefficient for these response curves obtained was >0.999. The efficiency of amplification was very similar (efficiencies were within 0.1). According to the results of this study the 18S rRNA gene can be recommended to serve as an endogenous control to avoid the false-negative results as well as for relative quantitative detection of GFAP gene in different tissues. The detection limit of this system was <0.01% of CNS tissues in meat products, which is 100 time less than the detection limit of two previously described commercial kits.20 In addition, both of these detection kits are based on immunological reactions and are not species specific.

In general, mRNA can have a short half-life within viable cells and is rapidly degraded by specific enzymes (RNases), which are themselves very stable even in environments outside the cell itself.21 It has been previously reported, that mRNA sequences from Escherichia coli could be amplified for up to 30 hours after cell death.22 In mammalian cells, the abundance of a particular mRNA can be many folds more than in bacteria. It has been demonstrated that mRNA degradation can be dependent on the sequence content23 or regions thereof.21 In the present study, the functional activity or the structural integrity of the GFAP mRNA was not investigated; only a small species-specific region of GFAP mRNA has been used as a marker of CNS tissues. This can explain the stability of this region during the food processing steps even after heat treatment.

For determination of expression level of GFAP mRNA in different organs, 2{Delta}{Delta}Ct method was used, which is included an endogenous control and a calibrator organ. The purpose of the endogenous control is to normalize the PCRs for the amount of the mRNA added to the reverse transcription reactions. The choice of calibrator for 2{Delta}{Delta}Ct method depends on the type of target gene. The data are presented as the fold change in gene expression normalized to the 18S rRNA gene and relative to the calibrator organ (in our case muscle as a primary component of the meat product). The present assay detected very low levels of GFAP in non-neural organs. The relative amount of GFAP expression obtained from all of these organs was less than 3.90E + 00. The peripheral nerve samples yielded a relative value of 2.41E + 02. This was in contrast to brain and spinal cord values of 1.46E + 05 and 1.88E + 06, respectively; corresponding to about 1000- and 10,000-fold more of GFAP mRNA content. The results of the GFAP levels in the different neural tissues obtained in the present study were comparable with the results demonstrated previously by other authors.7, 8

The Ct value obtained from all of these organs was above 35 cycles, whereas a concentration of 0.01% of brain exhibited a signal at Ct value of 32.23 (± 0.12) cycles. The peripheral nerve samples yielded a Ct value of 29.21 (± 0.10). The Ct values of brain and spinal cord were 18.45 (± 0.01) and 14.74 (± 0.16), respectively.

The peripheral nerve signal does not present a realistic problem in the analysis of CNS detection in meat and meat products. Peripheral nerves would be detected if present as one of the primary components of the meat product. Thus, if the peripheral nerves comprised more than 10% of the meat product, a fluorescent signal would be detected at the Ct value of 34.00 (± 1.20) cycles; this is equivalent to 0.047 ng cDNA/PCR reaction (data not shown). This signal is about one-seventeenth of the concentration value of 3.28 ng cDNA/PCR resulting from 0.1% brain. Therefore, the use of a standard curve and a cut-off value of significant CNS contamination of about 0.1% will circumvent this problem.

Analysis of IRM containing bovine brain homogenate and of bovine brain homogenate alone revealed GFAP mRNA RT-PCR signal stability. Enzymes released from minced muscle and brain tissue apparently did not influence the detectability of the bovine GFAP mRNA signal. Analogous results were found for the study of a heated meat product with varying amounts of bovine brain homogenate added. Ingredients and additives commonly used in sausages (see Materials and Method) and other meat products also did not influence the detection of bovine CNS tissue. In addition, it was demonstrated that the applied pasteurization conditions (core temperature, 80°C) had no significant negative effect on the bovine GFAP mRNA signal. Because 0.01% bovine brain homogenate was successfully detected in all of the experiments conducted and no false-negative results were obtained, we conclude that the detection limit is below 0.01% and must be determined in a future study along with the influence of extended heating (eg, sterilization, 121°C) and a long storage period.

According to the present results, an efficient method was used to detect the presence of CNS tissues in meat mixtures containing a minimum amount of bovine CNS tissues. The small mRNA region of the bovine GFAP was not considerably affected by a prolonged storage and heat denaturation of the rendering process, and its sensitivity proved to be high also when samples were further subjected to 80°C for 90 minutes. On the basis of these results and previously published studies,7, 8, 9, 10, 11, 16 it can be stated that bovine GFAP mRNA exhibits storage and heat stability.

In conclusion, quantitative real-time RT-PCR detection of GFAP appears to be useful as a routine diagnostic test for detection of the illegal use of bovine CNS tissue in meat and meat products. Bovine GFAP mRNA exhibits certain stability, facilitating the detection of CNS tissue in raw and heat-treated sausages. The technique should be evaluated through a ring trial to confirm the ability of the test in different laboratories. According to our knowledge, this is the first report of a real-time RT-PCR method for the species- and tissue-specific detection of bovine CNS tissue in meat and meat products. Furthermore, this approach seems to be promising for the species-specific detection of other banned tissue.



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Figure 4. Relative quantitative value (Log10) of different organs calculated relative to the organ muscle, normalized to the housekeeping gene.

 

    Acknowledgments
 
The expert technical assistance of Claudia Walter and Karin Simon is gratefully acknowledged.


    Footnotes
 
Address reprint requests to Dr. Amir Abdulmawjood, Institut für Tierärztliche Nahrungsmittelkunde, Justus-Liebig-Universität Giessen, Frankfurter Straße 92, D 35392 Giessen, Germany. E-mail: amir.abdulmaw-jood{at}vetmed.uni-giessen.de

Supported by the Federal Ministry of Consumer Protection, Food and Agriculture (Germany) as part of project AZ.: 01HS022/1.

Accepted for publication February 22, 2005.


    References
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 

  1. Center of Disease Control and Prevention (CDC): Bovine spongiform encephalopathy in a dairy cow: Washington State, 2003 Morbidity and Mortality Weekly Report (MMWR). 2004, 52:1280–1285; available at http://www.cdc.gov/mmwr/preview/mmwrhtml/mm5253a2.htm
  2. Bruce ME, Will RG, Ironside JW, McConnell I, Drummond D, Suttie A, McCardle L, Chree A, Hope J, Birkett C, Cousens S, Fraser H, Bostock CJ: Transmissions to mice indicate that ‘new variant’ CJD is caused by the BSE agent. Nature 1997, 2:498-501
  3. Collinge J, Sidle KC, Meads J, Ironside J, Hill AF: Molecular analysis of prion strain variation and the aetiology of ‘new variant’ CJD. Nature 1996, 24:685-690
  4. Cousens S, Smith PG, Ward H, Everington D, Knight RS, Zeidler M, Stewart G, Smith-Bathgate EA, Macleod MA, Mackenzie J, Will RG: Geographical distribution of variant Creutzfeldt-Jakob disease in Great Britain, 1994–2000. Lancet 2001, 357:1002-1007[Medline]
  5. Herzog C, Sales N, Etchegaray N, Charbonnier A, Freire S, Dormont D, Deslys JP, Lasmezas CI: Tissue distribution of bovine spongiform encephalopathy agent in primates after intravenous or oral infection. Lancet 2004, 363:422-428[Medline]
  6. Regulation (EC) No. 999/2001 of the European Parliament and of the Council of 22 May 2001. Laying down rules for the prevention, control and eradication of certain transmissible spongiform encephalopathies. L 147. CONSLEG System of the Official Publications of the European Communities, 2001, pp 1–40
  7. Schmidt GR, Hossner KL, Yemm RS, Gould DH, O’Callaghan JP: An enzyme-linked immunosorbent assay for glial fibrillary acidic protein as an indicator of the presence of brain or spinal cord in meat. J Food Prot 1999, 62:394-397[Medline]
  8. Schmidt GR, Yemm RS, Childs KD, O’Callaghan JP, Hossner KL: The detection of central nervous system tissue on beef carcasses and in comminuted beef. J Food Prot 2001, 64:2047-2052[Medline]
  9. Lücker E, Eigenbrodt E, Wenisch S, Failing K, Leiser R, Bülte M: Development of an integrated procedure for the detection of central nervous tissue in meat products using cholesterol and neuron-specific enolase as markers. J Food Prot 1999, 62:268-276[Medline]
  10. Lücker E, Eigenbrodt E, Wenisch S, Leiser R, Bülte M: Identification of central nervous system tissue in retail meat products. J Food Prot 2000, 63:258-263[Medline]
  11. Wenisch S, Lücker E, Eigenbrodt E, Leiser R, Bülte M: Detection of central nervous tissue in meat products: an immunohistochemical approach. Nutr Res 1999, 19:1165-1172
  12. : Bundesanzeiger (Federal Herald): Guiding principles for meat and meat products. German Food Code. 1994:pp 49-150 Bundesanzeiger, Köln
  13. Lekanne Deprez RH, Fijnvandraat AC, Ruijter JM, Moorman AF: Sensitivity and accuracy of quantitative real-time polymerase chain reaction using SYBR green I depends on cDNA synthesis conditions. Anal Biochem 2002, 307:63-69[Medline]
  14. Livak KJ, Schmittgen TD: Analysis of relative gene expression data using real-time quantitative PCR and the 2(-{Delta}{Delta}Ct) Method. Methods 2001, 25:402-408[Medline]
  15. Biedermann W, Lücker E, Hensel A: Detection of tissues of the central nervous system (CNS) as specified risk material (SRM) in meat products by means of gas chromatography-mass spectrometry (GC-MS). Berl Munch Tierärztl Wochenschr 2002, 115:131-133[Medline]
  16. Seyboldt C, John A, Mueffling TV, Nowak B, Wenzel S: Reverse transcription-polymerase chain reaction assay for species-specific detection of bovine central nervous system tissue in meat and meat products. J Food Prot 2003, 66:644-651[Medline]
  17. Mansur NR, Meyer-Siegler K, Wurzer JC, Sirover MA: Cell cycle regulation of the glyceraldehyde-3-phosphate dehydrogenase/uracil DNA glycosylase gene in normal human cells. Nucleic Acids Res 1993, 21:993-998[Abstract/Free Full Text]
  18. Zhong H, Simons JW: Direct comparison of GAPDH, beta-actin, cyclophilin, and 28S rRNA as internal standards for quantifying RNA levels under hypoxia. Biochem Biophys Res Commun 1999, 259:523-526[Medline]
  19. Schmid H, Cohen CD, Henger A, Irrgang S, Schlondorff D, Kretzler M: Validation of endogenous controls for gene expression analysis in microdissected human renal biopsies. Kidney Int 2003, 64:356-360[Medline]
  20. Hughson E, Reece P, Dennis MJ, Oehlschlager S: 2003 Comparative evaluation of the performance of two commercial kits for the detection of central nervous system tissue in meat. Food Addit Contam 2003, 20:1034-1043[Medline]
  21. Ross J: mRNA stability in mammalian cells. Microbiol Rev 1995, 59:423-450[Abstract/Free Full Text]
  22. Sela M, Anfinsen CB, Harrington WF: The correlation of ribonuclease activity with specific aspects of tertiary structure. Biochim Biophys Acta 1957, 26:502-512[Medline]
  23. Birch L, Dawson CE, Cornett JH, Keer JT: A comparison of nucleic acid amplification techniques for the assessment of bacterial viability. Lett Appl Microbiol 2001, 33:296-301[Medline]




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